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Bioinformatics operations, data types, formats, identifiers and topics
EDAM
All terms in EDAM
Label
Id
Description
Number of iterations
data_1693
[Number of iterations of an algorithm.]
Person name
data_1692
[The name of a person.]
Person identifier
data_2118
[An identifier of a software end-user (typically a person).]
Drug report
data_1696
[A human-readable collection of information about a specific drug.]
Small molecule report
data_0962
[A human-readable collection of information about a specific chemical compound.]
Small molecules
topic_0154
[Small molecules of biological significance, typically archival, curation, processing and analysis of structural information.]
dbGaP format
format_3729
[Input format used by the Database of Genotypes and Phenotypes (dbGaP).]
idXML
format_3764
[XML file format for files containing information about peptide identifications from mass spectrometry data analysis carried out with OpenMS.]
KNIME datatable format
format_3765
[Data table formatted such that it can be passed/streamed within the KNIME platform.]
Workflow format
format_2032
[Format of a workflow.]
DSV
format_3751
[Tabular data represented as values in a text file delimited by some character.]
Format
format_1915
[A defined way or layout of representing and structuring data in a computer file, blob, string, message, or elsewhere.]
CSV
format_3752
[Tabular data represented as comma-separated values in a text file.]
SEQUEST .out file
format_3758
["Raw" result file from SEQUEST database search.]
RNAi report
data_3427
[RNAi experiments.]
Simulation experiment report
data_3428
[biological computational model experiments (simulation), for example the minimum information required in order to permit its correct interpretation and reproduction.]
Raw image
data_3424
[Raw biological or biomedical image generated by some experimental technique.]
Carbohydrate property
data_3425
[Data concerning the intrinsic physical (e.g. structural) or chemical properties of one, more or all carbohydrates.]
Proteomics experiment report
data_3426
[Report concerning proteomics experiments.]
Genetic engineering
topic_3912
[The application of biotechnology to directly manipulate an organism's genes.]